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Complete DNA/RNA sequencing dataset for Australian ICGC ovarian cancer sequencing project 2014-07-07
Dataset ID | Technology | Samples |
---|---|---|
EGAD00001000877 | N/A | 331 |
Dataset Description
Complete WGS and RNA-Seq dataset for Australian ICGC ovarian cancer sequencing project 2014-07-07, representing 93 donors.
Sequencing was performed on Illumina HiSeq.
Alignment of the lane-level fastq data was performed with bwa (WGS data) and RSEM (transcriptome data).
For this dataset lane-level .bam files have been merged and de-duplicated to create a single bam file for each sample type (tumour/normal) for each donor.
This dataset supersedes all previous datasets for this study.
2016-08-08 updated with 14 outstanding RNA-seq samples & corresponding RSEM bams
2016-12-07 updated with 7 outstanding RNA-seq controls and corresponding RSEM bams