Department of Pathology and Tumor Biology, Kyoto University Data Access Committee

Dac ID Contact Person Email Access Information
EGAC00001000150 Dr. Seishi Ogawa sogawa-tky [at] umin [dot] ac [dot] jp No additional information is available

This DAC controls 6 datasets:

Dataset ID Description Technology Samples
EGAD00001000715 Exome sequencing was performed for paired tumor/normal samples from patients with corticotropin-independnet Cushing's syndrome. Tumor DNA was extracted from adrenocortical adenomas and normal DNA was extracted from adjacent adrenal tissues or periphral blood. Illumina HiSeq 2000 16
EGAD00001000896 NA Illumina HiSeq 2000 12
EGAD00001001302 NA Illumina HiSeq 2500 2
EGAD00001003891 Transcriptome sequencing was performed on 214 patients with myelodysplasia in this study. RNA was obtained from bone marrow CD34+ cells (n=100) and/or bone marrow mononuclear cells (n=165). Transcriptome sequencing was performed for both cell fractions in 51 patients. A total of 211 patients were genotyped by targeted deep sequencing. We also studied bone marrow CD34+ cells and bone marrow mononuclear cells obtained from three healthy adults each. Illumina HiSeq 2500 266
EGAD00010000542 Cusihg's syndrome normal samples using 250K Affymetrix 250K Nsp-GTYPE 16
EGAD00010000544 Cusihg's syndrome tumor samples using 250K Affymetrix 250K Nsp-GTYPE 16