DAC

DAC of Synergie Lyon Cancer

Dac ID Contact Person Email Access Information
EGAC00001000382 Vincent Le vincent [dot] letexier [at] lyon [dot] unicancer [dot] fr

This DAC controls 8 datasets:

Dataset ID Description Technology Samples
EGAD00001003399 RNAseq dataset of 34 samples (6 normals, 7 stroma-enriched, 21 malignant cells-enriched) from patients with resected pancreatic ductal carcinoma. Illumina HiSeq 4000 34
EGAD00001003835 Whole genome sequencing data of 25 prostate tumor and corresponding normal samples, aligned with the CGP BWA-mem workflow. Illumina HiSeq 2000 50
EGAD00001003898 This dataset provides whole genome sequencing data of normal/tumors pairs from 4 patients with uterine or ovarian carcinosarcoma using the HiSeq 2000 sequencing system. It includes 10 samples (4 normals, 4 uterine tumors and 2 ovarian tumors). Through separate whole genome sequencing of carcinomatous and sarcomatoid components, we analyse and compare the genomic alterations of these components. Illumina HiSeq 2000 10
EGAD00010000886 samples using Affymetrix HG_U133_+2 Affymetrix HG_U133_+2 99
EGAD00010001273 Affymetrix GeneChip® Human Transcriptome Array 2.0 Affymetrix GeneChip® Human Transcriptome Array 2.0 34
EGAD00010001274 Expression profiling by Nanostring cancer immune Nanostring Cancer Immune 30
EGAD00010001275 Affymetrix GeneChip® Human Transcriptome Array 2.0 Affymetrix GeneChip® Human Transcriptome Array 2.0 34
EGAD00010001276 Expression profiling by Nanostring cancer pathway Nanostring cancer pathway 30