DAC

Korean Gastric cancers data

Dac ID Contact Person Email Access Information
EGAC00001000439 Hark Kyun hkim [at] ncc [dot] re [dot] kr

This DAC controls 3 datasets:

Dataset ID Description Technology Samples
EGAD00010000889 Gencode control samples using SNP6.0 SNP6.0 183
EGAD00001001984 To identify recurrent somatic alterations in this unique subset of gastric cancers, whole exome and SNP6 analyses were performed using frozen cancer tissue. The somatic mutation analyses were also performed using blood of the same patients. Illumina HiSeq 2500; 160
EGAD00001002187 To identify transcriptome profile in this unique subset of gastric cancers, RNA-seq analyses were performed using frozen cancer tissue. Adjacent normal tissue of the same patients were used in differently expressed gene selection and fusion gene prediction. Illumina HiSeq 2500; 138