GIS-LUNGTCR-ITH1-2017_DAC

Alexander Lezhava
lejavaa@gis.a-star.edu.sg

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Dataset ID	Description	Technology	Samples
EGAD00001001978	This dataset contains FASTQ files for multi-region exome-sequencing of EGFR-mutant lung adenocarcinomas from Asian patient. There are 16 patients and 95 samples in total, including 16 controls and 79 tumors. Multiple runs for each sample, and 368 fastq in total. Please refer to the sample-ID from filename for merging.	Illumina HiSeq 2000	95
EGAD00001001979	This dataset contains BAM file for multi-region exome-sequencing of EGFR-mutant lung adenocarcinomas from Asian patient. There are 16 patients and 95 samples in total, including 16 controls and 79 tumors.	Illumina HiSeq 2000	95
EGAD00001001980	This dataset contains BAM files of targeted Amplicon deep-sequencing data, for validation of the mutations found in WES. There are 16 patients and 95 samples in total, including 16 controls and 79 tumors.	Illumina HiSeq 2500	95
EGAD00001001981	This dataset contains FASTQ files of targeted Amplicon deep-sequencing data, for validation of the mutations found in WES. There are 16 patients and 95 samples in total, including 16 controls and 79 tumors. 140 fastq in total, multiple runs for some of the samples. Please refer to the sample-ID from filename for merging.	Illumina HiSeq 2500	95
EGAD00010001176	This dataset contains 15 control SNP-array dataset from 15 EGFR mutant lung adenocarcinoma patients.	Illumina	15
EGAD00010001177	This dataset contains 61 tumors SNP-array dataset from 15 EGFR mutant lung adenocarcinoma patients.	Illumina	61