DAC

The EMC-HEMA-ALL DAC for adult acute lymphoblastic leukaemia data

Dac ID Contact Person Email Access Information
EGAC00001000533 Anita Rijneveld a [dot] rijneveld [at] erasmusmc [dot] nl No additional information is available

This DAC controls 1 dataset:

Dataset ID Description Technology Samples
EGAD00001006102 The Genomic DNA Clean & Concentrator kit (ZYMO Research) was used to remove EDTA from the DNA samples. Sample libraries were prepared using 100 ng of input according to the KAPA HyperPlus Kit (Roche) using Unique Dual Index adapters (Integrated DNA Technologies, Inc.). Exomes were captured using the SeqCap EZ MedExome (Roche Nimblegen) according to SeqCap EZ HyperCap Library v1.0 Guide (Roche) with the xGen Universal blockers – TS Mix (Integrated DNA Technologies, Inc.). The amplified captured sample libraries were paired-end sequenced (2x100 bp) on the Novaseq 6000 platform (Illumina) and aligned to the hg19 reference genome using the Burrows-Wheeler Aligner (BWA). Illumina NovaSeq 6000 10