DAC
DAC for patient-derived cell line samples
| Dac ID | Contact Person | Access Information | |
|---|---|---|---|
| EGAC00001000594 | Christian Conrad | c [dot] conrad [at] dkfz [dot] de | No additional information is available |
This DAC controls 2 datasets:
| Dataset ID | Description | Technology | Samples |
|---|---|---|---|
| EGAD00001003146 | We performed whole genome sequencing of nine OC patient-derived cell lines and one normal cell line (HOSEpiC) to analyze if the cell lines harbor OC-typical genomic aberrations absent in normal cells and to relate genomic features to drug sensitivities. | 10 | |
| EGAD00001004131 | Pheno-seq is a new approach that integrates high-throughput imaging and transcriptomic profiling of clonal spheroids/organoids to dissect functional tumor cell heterogeneity in 3D cell culture systems. The method is based on the iCELL8 technology (TakaraBio) that uses barcoded nanowells and a micro-solenoid valve dispenser. The CRC_spheroid dataset contains demultiplexed RNA-sequencing profiles (FASTQ file format, NextSeq 500) of 95 clonal tumor spheroids derived from a patient with colorectal cancer. | NextSeq 500 | 1 |
