Molecular profiling of MBD4-deficient acute myeloid leukaemia - DAC

majewski@wehi.edu.au

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Dataset ID	Description	Samples
EGAD00001003567	Reduced Representation Bisulfite Sequencing for WEHI-AML-1 and WEHI-AML-2. RRBS libraries were made with the NuGEN Ovation RRBS Methyl-Seq System. Bisulfite conversion was performed with the Qiagen Epitect kit. Sequencing was performed on an Illumina HiSeq2500.	7
EGAD00001003568	Genome sequencing at diagnosis and post induction for WEHI-AML-1 and WEHI-AML-2. Whole genome sequencing was performed on an Illumina HiSeq X Ten.	4
EGAD00001003569	Transcriptome sequencing for WEHI-AML-1 and WEHI-AML-2. RNA libraries were generated using the Illumina TruSeq RNA Sample Preparation Kit v2 and sequenced on an Illumina HiSeq2500.	9
EGAD00001003570	Exome sequencing for WEHI-AML-1 and WEHI-AML-2. Exome capture was performed with the Human All Exon v5_UTR Capture Library and the Agilent Technologies SureSelectXT2 Target Enrichment System, with sequencing on an Illumina HiSeq2500.	9