DAC

Centre for Genomic Regulation - Beta Cell Genome Regulation Lab

Dac ID Contact Person Email Access Information
EGAC00001000853 Jorge Ferrer j [dot] ferrer [at] imperial [dot] ac [dot] uk No additional information is available

This DAC controls 11 datasets:

Dataset ID Description Technology Samples
EGAD00001003992 Whole Human Islet paired-ended RNA-seq of 64 human pancreatic donors. Illumina Genome Analyzer IIx,Illumina HiSeq 2500 64
EGAD00001005201 13 ATAC-Seq datasets of human pancreatic islets from 13 donors Illumina HiSeq 2500 13
EGAD00001005202 6 ChIP-Seq datasets of Mediator in human pancreatic islets from 6 donors Illumina HiSeq 2500 6
EGAD00001005203 3 ChIP-Seq datasets of Cohesin in human pancreatic islets from 3 donors Illumina HiSeq 2500 3
EGAD00001005204 14 ChIP-Seq datasets of H3K27ac in human pancreatic islets from 14 donors, where islets were treated in high (11mM) glucose conditions. Samples IDs HI-129, HI-130, HI-131, HI-132, HI-135, HI-137 and HI-152 were also cultured in low glucose conditions. Illumina Genome Analyzer IIx,Illumina HiSeq 2500 14
EGAD00001005205 7 H3K27ac ChIP-Seq datasets from 7 donors where islets were treated in low (4mM) glucose conditions. Illumina HiSeq 2500 7
EGAD00001005206 4 Promoter-Capture Hi-C datasets of human pancreatic islets from 4 human islet donors Illumina HiSeq 2500 4
EGAD00001005207 7 RNA-Seq datasets in human pancreatic islets from 7 donors, where islets were treated in high (11mM) glucose conditions Illumina HiSeq 2500 7
EGAD00001005208 7 RNA-Seq datasets in human pancreatic islets from 7 donors, where islets were using low (4mM) glucose conditions. Illumina HiSeq 2500 7
EGAD00001005209 Input dataset of human islets. To be used in conjuction with Cohesin and Mediator ChIP-Seq datasets. Illumina HiSeq 2500 1
EGAD00001005210 2 Circular chromosome conformation capture (4C-Seq) datasets of the human beta cell line EndoC-bh1. Illumina HiSeq 2500 1