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Centre for Genomic Regulation - Beta Cell Genome Regulation Lab

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j.ferrer@imperial.ac.uk

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This DAC controls 11 datasets

Dataset ID	Description	Technology	Samples
EGAD00001003992	Whole Human Islet paired-ended RNA-seq of 64 human pancreatic donors.	Illumina Genome Analyzer IIx Illumina HiSeq 2500	64
EGAD00001005201	13 ATAC-Seq datasets of human pancreatic islets from 13 donors	Illumina HiSeq 2500	13
EGAD00001005202	6 ChIP-Seq datasets of Mediator in human pancreatic islets from 6 donors	Illumina HiSeq 2500	6
EGAD00001005203	3 ChIP-Seq datasets of Cohesin in human pancreatic islets from 3 donors	Illumina HiSeq 2500	3
EGAD00001005204	14 ChIP-Seq datasets of H3K27ac in human pancreatic islets from 14 donors, where islets were treated in high (11mM) glucose conditions. Samples IDs HI-129, HI-130, HI-131, HI-132, HI-135, HI-137 and HI-152 were also cultured in low glucose conditions.	Illumina Genome Analyzer IIx Illumina HiSeq 2500	14
EGAD00001005205	7 H3K27ac ChIP-Seq datasets from 7 donors where islets were treated in low (4mM) glucose conditions.	Illumina HiSeq 2500	7
EGAD00001005206	4 Promoter-Capture Hi-C datasets of human pancreatic islets from 4 human islet donors	Illumina HiSeq 2500	4
EGAD00001005207	7 RNA-Seq datasets in human pancreatic islets from 7 donors, where islets were treated in high (11mM) glucose conditions	Illumina HiSeq 2500	7
EGAD00001005208	7 RNA-Seq datasets in human pancreatic islets from 7 donors, where islets were using low (4mM) glucose conditions.	Illumina HiSeq 2500	7
EGAD00001005209	Input dataset of human islets. To be used in conjuction with Cohesin and Mediator ChIP-Seq datasets.	Illumina HiSeq 2500	1
EGAD00001005210	2 Circular chromosome conformation capture (4C-Seq) datasets of the human beta cell line EndoC-bh1.	Illumina HiSeq 2500	1