Breast cancer multi-region sequencing from Sottoriva Lab - EGA European Genome-Phenome Archive

Dac ID	Contact Person	Email	Access Information
EGAC00001000890	Andrea Sottoriva	andrea [dot] sottoriva [at] icr [dot] ac [dot] uk	No additional information is available

Dataset ID	Description	Technology	Samples
EGAD00001004122	Set of multi-region sequenced breast cancer primary samples, lymph nodes and ctDNA. We collected samples from 11 breast cancer patients with lymph node involvement but no sign of distant metastasis. We performed a mix of whole-exome sequencing, targeted capture sequencing, and whole-genome sequencing of primary tumour samples and lymph nodes, as well as targeted capture sequencing of circulating tumour DNA.	Illumina HiSeq 2500	183

Dataset ID

Description

Technology

Samples

EGAD00001004122

Set of multi-region sequenced breast cancer primary samples, lymph nodes and ctDNA. We collected samples from 11 breast cancer patients with lymph node involvement but no sign of distant metastasis. We performed a mix of whole-exome sequencing, targeted capture sequencing, and whole-genome sequencing of primary tumour samples and lymph nodes, as well as targeted capture sequencing of circulating tumour DNA.

Illumina HiSeq 2500

183

DAC

This DAC controls 1 dataset:

The European Genome-phenome Archive (EGA) is part of the ELIXIR infrastructure.