Breast cancer multi-region sequencing from Sottoriva Lab

Dac ID Contact Person Email Access Information
EGAC00001000890 Andrea Sottoriva andrea [dot] sottoriva [at] icr [dot] ac [dot] uk No additional information is available

This DAC controls 2 datasets:

Dataset ID Description Technology Samples
EGAD00001004122 Set of multi-region sequenced breast cancer primary samples, lymph nodes and ctDNA. We collected samples from 11 breast cancer patients with lymph node involvement but no sign of distant metastasis. We performed a mix of whole-exome sequencing, targeted capture sequencing, and whole-genome sequencing of primary tumour samples and lymph nodes, as well as targeted capture sequencing of circulating tumour DNA. Illumina HiSeq 2500 183
EGAD00001007828 661 bam files generated from high-throughput RNAseq of tumour biopsies from colorectal cancer patients NextSeq 500 661