ESCC DNA methylation biomarkers data access committee

Dac ID Contact Person Email Access Information
EGAC00001000991 Minghua Wang mhwang [at] suda [dot] edu [dot] cn No additional information is available

This DAC controls 1 dataset:

Dataset ID Description Technology Samples
EGAD00001004288 To validate the methylation status of the four candidate tumor suppressor genes (ADHFE1, EOMES, SALL1, TFPI2) in Han Chinese ESCC patients, we recruited 103 patients and obtained the paired tumors(entitled as T) and adjacent normal tissues (entitled as N) as well. Targeted bisulfite sequencing was conducted to detect the methylation profiles of these four genes in these 103 paired tissues. Furthermore, the raw sequence data (fastq files) was aligned using the BSseeker2 and this dataset included all of the bam file after alignment. Illumina HiSeq 2000 205