DAC

DAC for Peritoneal Mesothelioma sequencing study (LAGA-VPC)

Dac ID Contact Person Email Access Information
EGAC00001001093 Stephane Le Bihan slebihan [at] prostatecentre [dot] com No additional information is available

This DAC controls 2 datasets:

Dataset ID Description Technology Samples
EGAD00001004503 Whole exome sequencing data of 19 snap-frozen peritoneal mesothelioma (tumor) samples and 16 matched normal samples. Sequencing library was prepared using Ion AmpliSeq Exome RDY Library Preparation. Samples were sequenced on the Ion Proton System using the Ion PI Hi-Q Sequencing 200 Kit and Ion PI v3 chip. Ion Torrent Proton 35
EGAD00001004504 RNA-seq data of 15 snap-frozen tissue of peritoneal mesothelioma. The strand specific RNA library prepared using TruSeq (Illumina) and pair-end sequencing performed in Illumina HiSeq 4000. The datasets contains paired fastq files for each of 15 tumor samples. Illumina HiSeq 4000 15