Bone Tumor Reference Centre Data Access Commitee

Daniel Baumhoer
daniel.baumhoer@usb.ch

Request Access

Dataset ID	Description	Technology	Samples
EGAD00001006540	This dataset contains the WGS of 35 samples (high grade osteosarcoma). All cases were reviewed by an expert bone pathologist and have a tumour content of 50% minimum. Paired-end libraries from fresh frozen tumour samples were prepared using the Agilent SureSelectXT HumanV5 kit for whole-genome sequencing (WGS). These were sequenced together with a tumour complementary DNA on an Illumina HiSeq2500 (paired-end 100 bp). Sequencing reads were mapped to the GRCh37 human reference genome using HISAT2	Illumina HiSeq 2500	35