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Genomic Medicine Data Access Committee

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Jianjun Zhang
jzhang20@mdanderson.org

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This DAC controls 5 datasets

Dataset ID	Description	Technology	Samples
EGAD00001004960	multi-region exome sequencing of 116 pulmonary nodules including lung preneoplasia atypical adenomatous hyperplasia (AAH, N=22), adenocarcinoma in situ (AIS, N=27), minimally invasive adenocarcinoma (MIA, N=54) and invasive lung adenocarcinoma (ADC, N=13).	Illumina HiSeq 2500	320
EGAD50000000361	RNA sequencing was performed on 108 NSCLC tumor samples and their paired adjacent normal tissues (n=21) to identify associations with clinical and immune characteristics.	Illumina HiSeq 2000	129
EGAD50000000395	RNA sequencing of 168 pulmonary samples including lung preneoplasia atypical adenomatous hyperplasia (AAH, N=38), adenocarcinoma in situ (AIS, N=22), minimally invasive adenocarcinoma (MIA, N=19) and invasive lung adenocarcinoma (ADC, N=38) and adjacent lung tissues (Normal, N=62).	Illumina NovaSeq 6000	168
EGAD50000000396	Whole genome sequencing of 42 pulmonary samples including lung preneoplasia atypical adenomatous hyperplasia (AAH, N=5), adenocarcinoma in situ (AIS, N=7), minimally invasive adenocarcinoma (MIA, N=6) and invasive lung adenocarcinoma (ADC, N=8) and adjacent lung tissues (Normal, N=16).	Illumina NovaSeq 6000	42
EGAD50000000397	Multi-region exome sequencing of 271 pulmonary nodules and matched adjacent lung tissue including lung preneoplasia atypical adenomatous hyperplasia (AAH, N=49), adenocarcinoma in situ (AIS, N=42), minimally invasive adenocarcinoma (MIA, N=37), invasive lung adenocarcinoma (ADC, N=86) and adjacent lung tissues (Normal, N=57).	Illumina NovaSeq 6000	271