Functional Genomics of Acute Leukemia (Baldus Lab) - EGA European Genome-Phenome Archive

Dac ID	Contact Person	Email	Access Information
EGAC00001001181	Claudia Baldus	claudia [dot] baldus [at] uksh [dot] de	No additional information is available

Dataset ID	Description	Technology	Samples
EGAD00001004977	Bone marrow mononuclear cells from patients diagnosed with B cell precursor acute lymphoblastic leukemia were obtained at three sequential time points: first diagnosis, remission after chemotherapy and relapse. Genomic DNA was isolated and targeted gene panel sequencing was performed using a customized biotinylated RNA oligo pool (SureSelect, Agilent, Santa Clara, California) to hybridize the target regions comprising 362 kbp on a HiSeq2000. Target regions were selected to validate mutations previously identified in these samples using whole exome sequencing.	Illumina HiSeq 2000	150

Dataset ID

Description

Technology

Samples

EGAD00001004977

Bone marrow mononuclear cells from patients diagnosed with B cell precursor acute lymphoblastic leukemia were obtained at three sequential time points: first diagnosis, remission after chemotherapy and relapse. Genomic DNA was isolated and targeted gene panel sequencing was performed using a customized biotinylated RNA oligo pool (SureSelect, Agilent, Santa Clara, California) to hybridize the target regions comprising 362 kbp on a HiSeq2000. Target regions were selected to validate mutations previously identified in these samples using whole exome sequencing.

Illumina HiSeq 2000

150

DAC

This DAC controls 1 dataset:

The European Genome-phenome Archive (EGA) is part of the ELIXIR infrastructure.