DAC for the study EGAS00001003368

Dac ID Contact Person Email Access Information
EGAC00001001270 Claudia Kleinman claudia [dot] kleinman [at] mcgill [dot] ca No additional information is available

This DAC controls 4 datasets:

Dataset ID Description Technology Samples
EGAD00001005128 We profiled two human fetal brainstem specimens at 17 and 19 post-conception weeks by single-cell RNA-seq using 10X Chromium Single Cell 3'. The BAM files are provided. Illumina HiSeq 4000 2
EGAD00001005129 We profiled 11 patient tumor samples by single-cell and single-nuclei RNA-seq using 10X Chromium 3'. These include samples from the following entities: WNT-subtype medulloblastoma (N=3), embryonal tumors with multilayered rosettes (N=3), and atypical teratoid-rhabdoid tumors (N=5). The BAM files are provided. Illumina HiSeq 4000,unspecified 11
EGAD00001005130 We profiled 43 normal human adult brain and 11 normal human fetal brain specimens by bulk RNA-seq. The raw fastqs are provided. unspecified 54
EGAD00001005131 We profiled 186 patient tumor samples by bulk RNA-seq. These includes 38 embryonal brain tumors, 101 high-grade gliomas, 24 low-grade gliomas, 10 medulloblastoma and 13 matched normals. The raw fastqs are provided. Illumina HiSeq 2000,Illumina HiSeq 2500,Illumina HiSeq 4000,unspecified 186