DAC for the study EGAS00001003368

Nikoleta Juretic
nikoleta.juretic@affiliate.mcgill.ca

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Dataset ID	Description	Technology	Samples
EGAD00001005128	We profiled two human fetal brainstem specimens at 17 and 19 post-conception weeks by single-cell RNA-seq using 10X Chromium Single Cell 3'. The BAM files are provided.	Illumina HiSeq 4000	2
EGAD00001005129	We profiled 11 patient tumor samples by single-cell and single-nuclei RNA-seq using 10X Chromium 3'. These include samples from the following entities: WNT-subtype medulloblastoma (N=3), embryonal tumors with multilayered rosettes (N=3), and atypical teratoid-rhabdoid tumors (N=5). The BAM files are provided.	Illumina HiSeq 4000 unspecified	11
EGAD00001005130	We profiled 43 normal human adult brain and 11 normal human fetal brain specimens by bulk RNA-seq. The raw fastqs are provided.	unspecified	54
EGAD00001005131	We profiled 186 patient tumor samples by bulk RNA-seq. These includes 38 embryonal brain tumors, 101 high-grade gliomas, 24 low-grade gliomas, 10 medulloblastoma and 13 matched normals. The raw fastqs are provided.	Illumina HiSeq 2000 Illumina HiSeq 2500 Illumina HiSeq 4000 unspecified	186