DAC

SMC Colon cancer team

Dac ID Contact Person Email Access Information
EGAC00001001277 Woong-Yang Park woongyang [dot] park [at] samsung [dot] com No additional information is available

This DAC controls 2 datasets:

Dataset ID Description Technology Samples
EGAD00001005191 To evaluate 3 different tissue dissociation protocols or fresh vs. frozen cell preparations, we performed single-cell RNA sequencing on cancer or distant normal tissue dissociates from 2 colorectal cancer patients. Total 18,409 cells from 10 sample preparations were analyzed (5 primary colorectal cancer and 5 matched normal mucosa). The results suggest highly consistent cellular proportions were recovered with different sample preparation methods. Illumina HiSeq 2500 10
EGAD00001005198 To understand intrinsic cancer cell signatures and the surrounding microenvironemt and their interactions, we performed single-cell RNA sequencing on 63,689 cells from 23 patients with 23 primary colorectal cancer and 10 matched normal mucosa samples. Analyzing of primary colorectal cancer and normal mucosa samples show a comprehensive cellular landscape of colon cancer, which is a valuable resource for the development of therapeutic strategies. Illumina HiSeq 4000 33