DAC

WM comitee

Dac ID Contact Person Email Access Information
EGAC00001001315 Olivier BERNARD olivier [dot] bernard [at] inserm [dot] fr No additional information is available

This DAC controls 4 datasets:

Dataset ID Description Technology Samples
EGAD00001005322 DNA extracted from sorted CD19+ tumor cells (18 samples - 16 patients) was used for exome capture with the SureSelect All Exon Kit following the standard protocols. Paired-end sequencing (2 x 100 bp) was performed using HiSeq2000 sequencing instruments. The files are in FASTQ format. Illumina HiSeq 2000 18
EGAD00001005323 DNA extracted from sorted CD3+ cells (16 patients) was used for exome capture with the SureSelect All Exon Kit following the standard protocols. Paired-end sequencing (2 x 100 bp) was performed using HiSeq2000 sequencing instruments.The files are in FASTQ format. Illumina HiSeq 2000 16
EGAD00001005324 RNA was extracted from flow-sorted CD19+. RNA-Seq was performed on 32 samples of 30 patients (2 replicates per samples). RNA-Seq libraries were subjected to non-stranded paired-end (2 x 75 bp) sequencing on HiSeq 2500 (Illumina). The files are in FASTQ format. Illumina HiSeq 2500 64
EGAD00010001861 Genome-wide DNA methylation profiling of Waldenstrom's macroglobulinemia (WM) patient samples Infinium MethylationEPIC Kit (Illumina) 48