MD Anderson GU Data DAC 1

Dac ID Contact Person Email Access Information
EGAC00001001412 Padmanee Sharma padsharma [at] mdanderson [dot] org No additional information is available

This DAC controls 2 datasets:

Dataset ID Description Technology Samples
EGAD00001005712 46 BAM files from 23 urothelial bladder cancer patients on an immunotherapy clinical trial. PBMC normal samples and solid tumor samples are paired. Alignment was done by BWA with reference genome hg19. Illumina HiSeq 2000 46
EGAD00010001852 NanoString raw data for a noeadjuvant combination PD-L1 plus CTLA-4 blockade trial on patients with cisplatin-ineligible operable urothelial carcinoma. All samples were FFPE tumor samples. Raw probe count data (.RCC files) were generated from nCounter Digital Analyzer ( Nanostring expression immunology panel 34