Data access commitee to RUBY study

Alicia Tran Dien
alicia.tran-dien@gustaveroussy.fr

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Dataset ID	Description	Technology	Samples
EGAD00001006458	Whole genome sequencing was performed on 24 patients (tumor DNA paired to constitutional DNA). WGS libraries were subjected to paired-end (2 x 100 bp) sequencing on NovaSeq (Illumina). The 96 files are in FASTQ format.	Illumina NovaSeq 6000	48
EGAD00010002034	CASE SAMPLES USING Affymetrix SNP6.0 technology (Thermo Fisher Scientific company): OncoScan FFPE Assay Kit was used for FFPE tissue samples (designed for degraded DNA) and the Cytoscan HD Array Kit was used for the fresh-frozen tissues	Affymetrix	710