DAC

Children's Cancer Therapy Institute DAC

Dac ID Contact Person Email Access Information
EGAC00001001828 Charles Keller charles [at] cc-tdi [dot] org No additional information is available

This DAC controls 12 datasets:

Dataset ID Description Technology Samples
EGAD00001006621 This dataset contains DNA sequencing data for twelve hepatoblastoma tumor samples, four of which have matched normals. Nine of the samples also have RNA sequencing data from the tumor sample. The dataset comprises six samples from patient tissues and six from cell lines; see metadata for details. Illumina HiSeq 2500,Illumina HiSeq 4000 12
EGAD00001006622 This dataset comprises DNA sequencing for tumor and matched normal from an Alveolar Rhabdomyosarcoma patient. It also include RNA sequencing data from the tumor sample. Illumina HiSeq 4000 1
EGAD00001007515 This dataset contains different samples from a single patient with SEF. The dataset contains whole genome, whole exome and RNAseq information. Two of the DNA sequencing samples also contain matched normals. HiSeq X Ten,Illumina HiSeq 2500,unspecified 6
EGAD00001007516 This dataset contains different samples from a single patient with SEF. The dataset contains whole genome, whole exome and RNAseq information. Two of the DNA sequencing samples also contain matched normals. HiSeq X Ten,Illumina HiSeq 2500,unspecified 6
EGAD00001007778 This dataset contains samples from 9 patients with alveolar rhabdomyosarcoma. 9 samples have whole exome data (one has multiple). 6 samples have RNAseq data (one has multiple). 6 samples have matched normals dna sequence data Illumina HiSeq 2000 16
EGAD00001007939 This dataset contains samples from 9 patients with embryonal rhabdomyosarcoma. 9 samples have whole exome tumor data (one has multiple). 7 samples have tumor RNAseq data. 1 sample has matched normal dna sequence data Illumina HiSeq 2000 10
EGAD00001008117 This dataset contains samples from 13 patients with osteosarcoma. 13 samples have whole exome tumor data. 12 samples have tumor RNAseq data. 3 samples have matched normal dna sequence data Illumina HiSeq 2000 16
EGAD00001008282 This dataset contains samples from 5 patients with ewings sarcoma. 5 samples have whole exome tumor data. 1 sample has tumor RNAseq data. 4 samples have matched normal dna sequence data Illumina HiSeq 2000 9
EGAD00001008283 This dataset contains samples from 5 patients with wilm's tumor. 5 samples have whole exome tumor data. 4 samples have tumor RNAseq data. 2 samples have matched normal dna sequence data Illumina HiSeq 2000 7
EGAD00001008515 This deposit consists of DNA and RNA sequencing data from 32 EPS patients. 28 samples had tumor DNA sequencing data. 2 had matched normal sequencing data. 27 samples had tumor RNA sequencing data. Illumina HiSeq 2000 32
EGAD00001008611 This deposit consists of DNA and RNA sequencing data from 67 CCS samples. 55 samples had tumor DNA sequencing data. 6 had matched normal sequencing data. 34 samples had tumor RNA sequencing data. Illumina HiSeq 2000,Illumina HiSeq 4000 67
EGAD00001008974 This dataset contains DNA and RNA sequencing information for AML, Gliomas, brain tumors (medulloblastoma and ependymoma), DIPG, rhabdoid tumors and soft tissue sarcomas. In total 39 samples are present (14 matched normal, 25 tumor samples). Not all samples have matched normals and not all samples have RNA sequencing data.. HiSeq X Ten,Illumina HiSeq 2000,Illumina HiSeq 2500 37