DAC for "Detection of Gene Fusions using Targeted Next-Generation Sequencing – a Comparative Evaluation"

Dac ID Contact Person Email Access Information
EGAC00001001905 Axel Hillmer ahillmer [at] uni-koeln [dot] de No additional information is available

This DAC controls 1 dataset:

Dataset ID Description Technology Samples
EGAD00001006913 Five commercially available parallel sequencing assays were evaluated for their ability to detect gene fusions in eight cell lines and 18 FFPE tissue samples carrying a variety of known gene fusions. Four RNA-based assays and one DNA-based assay were compared; two were hybrid capture-based, TruSight Tumor 170 Assay (Illumina) and SureSelect XT HS Custom Panel (Agilent), and three were amplicon-based, Archer FusionPlex Lung Panel (ArcherDX), QIAseq RNAscan Custom Panel (Qiagen) and Oncomine Focus Assay (Thermo Fisher Scientific). Illumina MiSeq,Ion Torrent S5,NextSeq 500 228