DAC for studying human normal breast cells

Dac ID Contact Person Email Access Information
EGAC00001002498 Rene Villadsen renev [at] sund [dot] ku [dot] dk No additional information is available

This DAC controls 1 dataset:

Dataset ID Description Technology Samples
EGAD00001008499 The dataset includes 12 paired FASTQ files (6 samples) with single cell transcriptome sequencing data of normal breast luminal cells from ducts and TDLUs derived from reduction mammoplasties from three patients. Chromium Single Cell 3’ Reagent Kit v2 or v3 (10x Genomics) were used for processing of cells, whereafter sequencing was performed using the Illumina® NextSeq500/550 High Output Kit v2. Cell Ranger was used for generating FASTQ files and files from different lanes were concatenated prior to uploading the data to EGA. "R1" files include the feature barcodes and UMIs, while "R2" files include the reads. NextSeq 550 6