LungNENomics data access commitee

Matthieu Foll and Lynnette Fernandez-Cuesta
rcg@iarc.fr

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Dataset ID	Description	Technology	Samples
EGAD00001015520	Raw whole-genome sequencing data from the lungNENomics cohort, comprising 178 CRAM files from 72 individuals.	HiSeq X Five	1
EGAD00001015524	Raw RNA-seq data from the lungNENomics cohort, comprising 319 pairs of FASTQ files from 179 individuals. This dataset also includes a gene count matrix, gene TPM matrix and gene expression VST matrix from 244 samples.	Illumina NovaSeq 6000	1
EGAD00001015672	Annotated germline variant calls derived from WGS data for 72 individuals from the lungNENomics cohort. Variant calling was performed with Strelka2 and annotation with InterVar.		1
EGAD00010002480	Data from Infinium EPIC 850K DNA methylation beadchip	Infinium EPIC DNA methylation beadchip	280