Need Help?

Molecular Pathology of Lymphoid Neoplasms

Contact Information

Elias Campo Güerri
ecampo@clinic.cat

Request Access

This DAC controls 11 datasets

Dataset ID	Description	Technology	Samples
EGAD00001008953	Whole-exome sequencing	Illumina HiSeq 2000	1
EGAD00001008954	Whole-genome sequencing data	unspecified	67
EGAD00001008959	RNA-seq data	unspecified	-
EGAD00001008960	Single cell DNA-seq data (CLL gene panel - Tapestri single-cell DNA CLL panel, Mission Bio)	Illumina NovaSeq 6000	-
EGAD00001008962	ATAC-seq data. Dataset includes FASTQ files, BAM files, and analysis files with the ATAC-seq peaks determined using MACS2.	unspecified	-
EGAD00001008964	ChIP-seq peaks of H3K27ac. The dataset includes FASTQ files, BAM files, and analyses of the ChIP-seq peaks of H3K27ac determined using MACS2	unspecified	-
EGAD00010002321	Methylation arrays (850K)	EPIC BeadChips (Illumina)	33
EGAD50000000800	This dataset contains BAM files from whole-genome sequencing (WGS) of 3 agressive B-cell lymphoma tumour samples for cases 1, 6, and 7 as well as the corresponding non-tumor whole-genome sequencing BAM files.	unspecified	6
EGAD50000000801	This dataset contains BAM files from capture-based targeted sequencing of 12 agressive B-cell lymphoma tumour samples for cases 1 to 6 and 8 to 13. The sequencing panel used is a MCL-oriented panel containing 159 genes.	NextSeq 2000	13
EGAD50000000802	This dataset contains BAM files from capture-based targeted sequencing of 4 agressive B-cell lymphoma tumour samples for cases 2, 3, 4 and 13. The sequencing panel used is a DLBCL-oriented panel containing 136 genes, described in Mozas P. et al., Hematol Oncol 2023.	unspecified	4
EGAD50000000803	This dataset contains BAM files from whole-exome sequencing (WES) of 5 agressive B-cell lymphoma tumour samples for cases 2, 3, 4 and 5. For case 2, non-tumor whole-exome sequencing is also available.	unspecified	6