DAC

High hyperdiploid ALL single cell whole genome sequencing data Data Access Commitee

Dac ID Contact Person Email Access Information
EGAC00001002737 Kajsa Paulsson kajsa [dot] paulsson [at] med [dot] lu [dot] se No additional information is available

This DAC controls 1 dataset:

Dataset ID Description Technology Samples
EGAD00001008988 This dataset was collected from viable bone marrow cells obtained at diagnosis from nine patients with high hyperdiploid ALL and one normal bone marrow sample. All samples were subjected to low pass single cell whole genome sequencing with the median sequencing coverage of 0.02x. Single nuclei in G0/G1 phase were isolated using a fluorescence-activated cell sorting (FACS) cytometer. DNA libraries were constructed and associated next-generation sequencing was carried out by European Research Institute for the Biology of Ageing (ERIBA), University of Groningen, University Medical Center Groningen, Groningen, The Netherlands. Further details regarding the DNA libraries construction are available by Bos et. al., 2019 (https://link.springer.com/protocol/10.1007/978-1-4939-8931-7_15). NextSeq 550 2842