KiCS Data Access Committee

Adam Shlien
adam.shlien@sickkids.ca

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Dataset ID	Description	Technology	Samples
EGAD00001009698	Data from samples that are marked for academic use only	HiSeq X Ten Illumina NovaSeq 6000	3
EGAD00001009699	Data from samples that are marked for both academic and for-profit use.	HiSeq X Ten Illumina NovaSeq 6000	425
EGAD50000000594	Our cohort represents infants with ALL in whom KMT2Ar was not detected by FISH or by standard cytogenetics. Whole-genome sequencing (WGS) was performed using Illumina’s HiSeqX to a depth of >30X.	HiSeq X Ten	23
EGAD50000000595	Our cohort represents infants with ALL in whom KMT2Ar was not detected by FISH or by standard cytogenetics. Whole-transcriptome sequencing (WTS) libraries were prepared using the NEBNext Ultra II RNA Directional library kit for samples with at least 100ng RNA (n=19), the Clontech double stranded cDNA conversion kit plus the Nextera XT library protocol for samples with less than 100ng RNA (n=4), or ribodepletion using NEBNext rRNA Depletion Kit v2 (Human/Mouse/Rat) for Total RNA (n=1). Libraries were paired-end sequenced using the Illumina HiSeq 2500.	Illumina HiSeq 2500	28