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Institut Curie Data Access Commitee

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emanuela.romano@curie.fr

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This DAC controls 8 datasets

Dataset ID	Description	Technology	Samples
EGAD00001010911	10 samples sequenced in Target-sequencing of a panel of 571 genes (Illumina NovaSeq 6000) - Raw FASTQ data - Annotated VCF	Illumina NovaSeq 6000	10
EGAD00001010912	15 samples sequenced in RNA-seq. This dataset contains their raw FASTQ data and the raw count table and the TPM count table.	Illumina NovaSeq 6000	15
EGAD50000000748	Dataset of the study "Synergy study: "Tissue resident CD8+ T cell clonal expansion in advanced triple negative breast cancer is associated with response to chemoimmunotherapy". This dataset contains the cellranger's gene-expression matrices for the 5 prime single-cell RNA sequencing experiments		40
EGAD50000000871	Raw data FASTQ files of RNAseq (Stranded mRNA prep Ligation-Illumina on NovaSeq 6000, 100bp paired-end) & WGS (PCR Free Roche KAPA Hyper Prep Library on Illumina Novaseq 6000, 150bp paired-end) for 40 samples corresponding to the matched tumor/normal of 10 patients. Raw data FASTQ files of WGS (PCR Free Roche KAPA Hyper Prep Library on Illumina Novaseq 6000, 150bp paired-end) of the tumor of two additional patients.	Illumina HiSeq 2000 Illumina NovaSeq 6000	22
EGAD50000000875	RNA-Seq raw data of PDX treated with acetalaxor bisacodyl for 4h00 to 24h00.	Illumina NovaSeq 6000	24
EGAD50000000876	RNA-Seq raw data of untreated breast cancer xenografts known as good or bad acetalax responders.	Illumina NovaSeq 6000	17
EGAD50000001013	Raw paired FASTQ data of patients at baseline from the PEVOsq cohort	Illumina NovaSeq 6000	154
EGAD50000001490	This dataset is composed of 159 RNAseq data (fastq, bam and count tables) and 35 targeted DNAseq data (fastq).	Illumina NovaSeq 6000	194