Diffuse Midline Glioma Proteomics Data Access Committee

cynthia.hawkins@sickkids.ca

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Dataset ID	Description	Technology	Samples
EGAD00010002541	TMT-labelled, SCX fractionation, global protein methylation profiled	Thermo orbitrap fusion lumos	30
EGAD00010002548	TMT-labelled, phosphopeptides enriched	Thermo orbitrap fusion lumos	30
EGAD00010002549	TMT-labelled, total proteome profiled	Thermo orbitrap fusion lumos	30
EGAD50000000326	Targeted glioma panel sequencing of pediatric hemispheric high-grade gliomas and diffuse midline gliomas. File type is paired-read fastq files (2 per sample). Sequencing was performed on Illumina NextSex instruments. Genes covered: TP53, H3F3A, HIST1H3B, HIST1H3C, IDH1, IDH2, KRAS, PIK3CA, TERT promoter, PTPN11, FGFR1/2/3, MYB, BRAF, MYBL1, EGFR, PDGFRA, MYCN, MYC, CDKN2A.	NextSeq 500	140
EGAD50000000560	Low pass WGS and targeted glioma panel sequencing of low and high-grade gliomas in children, adolescent, and young adult patients.. File type is paired-read fastq files (2 per sample). Sequencing was performed on Illumina NextSex instruments. Genes covered on panel: TP53, H3F3A, HIST1H3B, HIST1H3C, IDH1, IDH2, KRAS, PIK3CA, TERT promoter, PTPN11, FGFR1/2/3, MYB, BRAF, MYBL1, EGFR, PDGFRA, MYCN, MYC, CDKN2A.	NextSeq 500	240