DAC Pediatric tumors SJD IRB

Núria López-Bigas
bbglab@irbbarcelona.org

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Dataset ID	Description	Technology	Samples
EGAD50000000237	Whole Genome Sequencing (120X) of the two tumors and blood from 4 pediatric cases with second malignancies (12 WGS)	Illumina NovaSeq X	12
EGAD50000000238	Whole Genome Sequencing of normal tissues from case 3 (9 WGS 120X), including parents blood Whole Genome Sequencing (2 WGS 30X).	Illumina NovaSeq X	11
EGAD50000000239	Duplex Sequencing of normal and tumor tissues from case 2 and case 3 (10 DS)	Illumina NovaSeq X	10
EGAD50000000240	Whole Genome Sequencing of 2 expanded clones from a cell line derived from the rhabdoid tumor case 3 (2 WGS 20X)	Illumina NovaSeq X	2
EGAD50000002993	WGS CRAM files from SJD clonal expansions from derived cell lines. doi: https://doi.org/10.64898/2026.06.30.735306 https://github.com/bbglab/rhabdoids-genomic-evolution/tree/main	Illumina NovaSeq X	6
EGAD50000002994	WGS CRAM files from SJD rhabdoid samples doi: https://doi.org/10.64898/2026.06.30.735306 https://github.com/bbglab/rhabdoids-genomic-evolution/	Illumina NovaSeq X	41
EGAD50000002995	WGS CRAM files from PMC rhabdoid samples doi: https://doi.org/10.64898/2026.06.30.735306 https://github.com/bbglab/rhabdoids-genomic-evolution/	Illumina NovaSeq X	5