Study

Genetic landscape of pediatric Low Grade Gliomas & Glioneuronal tumors

Study ID Alternative Stable ID Type
EGAS00001000255 Whole Genome Sequencing

Study Description

We performed whole-genome sequencing of 42 paired tumor/normal LGG genomes and analyzed somatically acquired single nucleotide variations (SNVs), insertion/deletions, structural variations and copy number variations in the cancer genomes

Study Datasets 11 datasets.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001000161
DATA FILES FOR SJLGG
Illumina HiSeq 2000 33
EGAD00001000352
DATA FILES FOR SJLGG
Illumina HiSeq 2000 7
EGAD00001000353
DATA FILES FOR SJLGG
Illumina HiSeq 2000 45
EGAD00001000655
DATA FILES FOR Histone-NSD2_RNASeq
Illumina HiSeq 2000 8
EGAD00001000695
DATA FILES FOR SJLGG
Illumina HiSeq 2000 46
EGAD00001001352
Data files for CONSERTING (WGS)
Illumina HiSeq 2000 38
EGAD00001001432
PCGP Germline Study Whole Genome Sequencing
Illumina HiSeq 2000 1337
EGAD00001001664
LGG Epilepsy Cohort WGS
Illumina HiSeq 2000 18
EGAD00001001665
LGG Epilepsy Cohort WXS
Illumina HiSeq 2000 61
EGAD00001001666
LGG Epilepsy Cohort RNA-Seq
Illumina HiSeq 2000 34
EGAD00010000462
SJLGG Case samples using Gene Expression Array
Affymetrix_U133v2 75

Who archives the data?

Publications

Citations

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