Genetic landscape of pediatric Rhabdomyosarcoma - EGA European Genome-Phenome Archive

Study

Genetic landscape of pediatric Rhabdomyosarcoma

Study ID	Alternative Stable ID	Type
EGAS00001000256		Other

Study Description

We performed whole-genome sequencing of 13 paired tumor/normal Rhabdomyosarcoma genomes and analyzed somatically acquired single nucleotide variations SNVs, insertion/deletions, structural variations and copy number variations in the cancer genomes

Study Datasets 6 datasets.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001000164	Whole Genome Sequencing accompanying Genetic landscape of pediatric Rhabdomyosarcoma. Whole Genome Sequencing accompanying Genetic landscape of pediatric Rhabdomyosarcoma.	Illumina HiSeq 2000	29
EGAD00001000878	RNA-Seq files accompanying Genetic landscape of pediatric Rhabdomyosarcoma RNA-Seq files accompanying Genetic landscape of pediatric Rhabdomyosarcoma	Illumina HiSeq 2000	42
EGAD00001001059	Whole Exome Sequencing files accompanying Genetic landscape of pediatric Rhabdomyosarcoma Whole Exome Sequencing files accompanying Genetic landscape of pediatric Rhabdomyosarcoma	Illumina HiSeq 2000	56
EGAD00001001432	PCGP Germline Study Whole Genome Sequencing PCGP Germline Study Whole Genome Sequencing	Illumina HiSeq 2000	1337
EGAD00001001433	PCGP Germline Study Whole Exome Sequencing PCGP Germline Study Whole Exome Sequencing	Illumina HiSeq 2000	906
EGAD00010001596	DNA methylation data from patient RMS tumor samples from Illumina 450 K arays DNA methylation data from patient RMS tumor samples from Illumina 450 K arays	Illlimuna EPIC 450 K	32

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