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HKU Gastric Cancer Genomics study - WGS, DNA genotyping array, expression and methylation profiling

HKU Gastric Cancer Genomics study - Whole Genome Sequencing, DNA genotyping array, Expression profiling and Methylation profiling

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001000782 Illumina HiSeq 2000 190
EGAD00010000528 -
EGAD00010000532 -
EGAD00010000534 -
Publications Citations
Identification of neutral tumor evolution across cancer types.
Nat Genet 48: 2016 238-244
295
Mutation hotspots at CTCF binding sites coupled to chromosomal instability in gastrointestinal cancers.
Nat Commun 9: 2018 1520
77
Immune signatures correlate with L1 retrotransposition in gastrointestinal cancers.
Genome Res 28: 2018 1136-1146
32
Accurate somatic variant detection using weakly supervised deep learning.
Nat Commun 13: 2022 4248
5
Oncogenic structural aberration landscape in gastric cancer genomes.
Nat Commun 14: 2023 3688
3