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Whole genome sequencing of Japanese HCCs

To determine somatic mutation profiles and substitution signatures in Japanese HCC, we performed whole genome sequencing of 31 HCCs with various epidemiological backgrounds. Somatic mutations and rearrangements were determined as previously reported. The data will be deposited to the ICGC database and is used for further comparative and integrative analyses.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001001262 Illumina Genome Analyzer IIx Illumina HiSeq 2000 31
EGAD00001001263 Illumina Genome Analyzer IIx Illumina HiSeq 2000 31
Publications Citations
Epigenetic landscape influences the liver cancer genome architecture.
Nat Commun 9: 2018 1643
Advances in genomic hepatocellular carcinoma research.
Gigascience 7: 2018 None
The Identification and Interpretation of cis-Regulatory Noncoding Mutations in Cancer.
High Throughput 8: 2018 E1