Study
APCDR AGV Project: The African Genome Variation Project(dense array genotyping data)
Study ID | Alternative Stable ID | Type |
---|---|---|
EGAS00001000959 | Other |
Study Description
The African Genome Variation Project (AGVP) aims to provide a global resource to understand population diversity and help design, implement and interpret genomic studies in sub-Saharan Africa (SSA), and worldwide. The AGVP represents dense genotyping data on 1,481 individuals from 18 ethno-linguistic groups and low coverage whole genome sequencing data on 320 individuals from 7 ethno-linguistic groups in SSA.
Study Datasets 13 datasets.
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
Dataset ID | Description | Technology | Samples |
---|---|---|---|
EGAD00010001045 |
APCDR AGV Project: Array data from 99 Igbo. Raw data, intensity files and post-QC Plink files.
|
Illumina HumanOmni2.5-4v1_B | N/A |
EGAD00010001046 |
APCDR AGV Project: Array data from 86 Sotho. Raw data, intensity files and post-QC Plink files.
|
Illumina HumanOmni2-5_8v1_A | N/A |
EGAD00010001047 |
APCDR AGV Project: Array data from 107 Ethiopians (Amhara, Oromo, Somali; subset of Ethiopian Genome Project Genotyping). Raw data, intensity files and post-QC Plink files.
|
Illumina HumanOmni2-5_8v1_A | N/A |
EGAD00010001048 |
APCDR AGV Project: Array data from 79 Jola. Raw data, intensity files and post-QC Plink files.
|
Illumina HumanOmni2-5_8v1_A | N/A |
EGAD00010001049 |
APCDR AGV Project: Array data from 99 Kikuyu. Raw data, intensity files and post-QC Plink files.
|
Illumina HumanOmni2.5-4v1_B | N/A |
EGAD00010001050 |
APCDR AGV Project: Array data from 78 Wolof. Raw data, intensity files and post-QC Plink files.
|
Illumina HumanOmni2-5_8v1_A | N/A |
EGAD00010001051 |
APCDR AGV Project: Array data from 97 Barundi. Raw data, intensity files and post-QC Plink files.
|
Illumina HumanOmni2-5_8v1_A | N/A |
EGAD00010001052 |
APCDR AGV Project: Array data from 100 Kalenjin. Raw data, intensity files and post-QC Plink files.
|
Illumina HumanOmni2.5-4v1_B | N/A |
EGAD00010001053 |
APCDR AGV Project: Array data from 100 Banyarwanda. Raw data, intensity files and post-QC Plink files.
|
Illumina HumanOmni2.5-4v1_B and HumanOmni2-5_8v1_A | N/A |
EGAD00010001054 |
APCDR AGV Project: Array data from 74 Fula
|
Illumina HumanOmni2-5_8v1_A | N/A |
EGAD00010001055 |
APCDR AGV Project: Array data from 100 Baganda. Raw data, intensity files and post-QC Plink files.
|
N/A | |
EGAD00010001056 |
APCDR AGV Project: Array data from 100 Zulu. Raw data, intensity files and post-QC Plink files.
|
Illumina HumanOmni2.5-4v1_B and HumanOmni2-5_8v1_A | N/A |
EGAD00010001057 |
APCDR AGV Project: Array data from 88 Mandinka. Raw data, intensity files and post-QC Plink files.
|
Illumina HumanOmni2-5_8v1_A | N/A |
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