Study

ICGC Breast Cancer Project

Study ID Alternative Stable ID Type
EGAS00001001195 Other

Study Description

A comprehensive characterisation and analysis of human breast cancers through genome-wide approaches including genomics, transcriptomics and epigenomics.

Study Datasets 4 datasets.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001001388
Whole-genome bisulfite sequencing (WGBS) on 30 breast cancer cases from the BASIS project.
Illumina HiSeq 2000 30
EGAD00010000915
Affymetrix SNP6.0 breast cancer genome sequencing data
Affymetrix SNP6.0 344
EGAD00010000916
BASIS breast cancer DNA methylation Illumina 450k
Illumina 450k 457
EGAD00010000917
399 tumors profiled using Agilent miRNA microarrays (Product Number G4872A, design ID 046064). The arrays are based on miRBase release 19.0 and 2006 human miRNAs are represented. 150 ng total RNA was used as input.
Agilent miRNA microarrays 399

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