Study

TraIT Cell Line use case

Study ID Alternative Stable ID Type
EGAS00001001476 Other

Study Description

Experimental data collected from a set of cell lines. To be used as a test for pipelines and infrastructure.

Study Datasets 12 datasets.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001002250
mRNA-Seq, HiSeq 2000 dataset of the Cell-line use case
Illumina HiSeq 2000; 1
EGAD00001002109
TSACP TruSeq Amplicon Panel dataset for the TraIT cell line use case
5
EGAD00001002069
Complete genomics data for VCaP and PC346c.
2
EGAD00001002071
qDNAseq shallow sequencing dataset of the cell line use case.
5
EGAD00001001626
RNA-Seq Illumina GAII dataset for the TraIT cell-line use case (added reverse and forward reads).
Illumina Genome Analyzer II; 6
EGAD00010000936
Affymetrix Exon Array dataset
Affymetrix GeneChip Human Exon 1.0 ST 2
EGAD00010001006
Proteomics LC-MS MS dataset
Liquid chromatography–mass spectrometry 8
EGAD00010000934
Agilent miRNA dataset
Agilent SurePrint Human miRNA Microarray 2
EGAD00010000937
ACGH 180K dataset
Agilent 180K 5
EGAD00010000935
ACGH 244K dataset
Agilent 244K 10
EGAD00010000939
Illumina 1M SNP Array dataset
Illumina 1M SNP Array 2
EGAD00010000938
mRNA Array Agilent 44K dataset
Agilent 44K 16

Who archives the data?

There are no publications available