Study
Korean Young Age Diffuse Gastric Cancers
| Study ID | Alternative Stable ID | Type |
|---|---|---|
| EGAS00001001711 | Other |
Study Description
The incidence of diffuse gastric cancers (DGC) remains steadily high, but relatively small numbers of DGCs have been evaluated with whole exome sequencing (WES). Clinicopathological features of DGC vary according to age, but the molecular basis for these variations is unclear. To identify genomic alteration in this unique subset of gastric cancers, whole exome and SNP6 analyses were performed using frozen cancer tissue. The same analyses were also performed using blood of the same patients.
Study Datasets 3 datasets.
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
| Dataset ID | Description | Technology | Samples |
|---|---|---|---|
| EGAD00001001984 |
To identify recurrent somatic alterations in this unique subset of gastric cancers, whole exome and SNP6 analyses were performed using frozen cancer tissue. The somatic mutation analyses were also performed using blood of the same patients.
|
Illumina HiSeq 2500 | 160 |
| EGAD00001003953 |
Fastq files for the whole genome sequencing data (Illumina HiSeq 2500; 32.6-fold) for two diffuse gastric cancers revealing the fusion breakpoints.
2102T: CTNND1-ARHGAP26 gene fusion (g.chr11:57,578,103-g.chr5:142,358,707)
354T: ANXA2-MYO9A gene fusion (g.chr15:60,656,550-g.chr15:72,157,966)
|
Illumina HiSeq 2500 | 2 |
| EGAD00010000889 |
Gencode control samples using SNP6.0
|
SNP6.0 | 183 |
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