Study
Investigating genetic susceptibility to rheumatic heart disease in Oceania
Study ID | Alternative Stable ID | Type |
---|---|---|
EGAS00001001881 | Other |
Study Description
This case-control study investigated susceptibility to rheumatic heart disease in over 3,000 individuals recruited across eight Oceanian countries. Cases were patients with rheumatic heart disease and controls were members of the general population. In addition to the Illumina HumanCore-24 BeadChip genotyping, a subset of 128 samples were analysed using the higher density Illumina HumanOmniExpressExome BeadChip of which 64 were also analysed using low coverage sequencing with the Illumina HiSeq 4000 platform.
Study Datasets 12 datasets.
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
Dataset ID | Description | Technology | Samples |
---|---|---|---|
EGAD00001002665 |
Mapped sequence reads in BAM format for 64 individuals reporting Kanak ancestry recruited in New Caledonia sequenced at four times target coverage using the Illumina HiSeq 4000 platform.
|
64 | |
EGAD00010000953 |
Healthy adult volunteers and newborns recruited in various countries across Oceania.
|
HumanCore-24 BeadChip | 937 |
EGAD00010000954 |
Healthy volunteers recruited in New Caledonia
|
HumanCore-24 BeadChip | 356 |
EGAD00010000955 |
Rheumatic heart disease cases recruited in Fiji with higher density genotyping
|
HumanOmniExpressExome-8 BeadChip | 32 |
EGAD00010000956 |
Rheumatic heart disease cases recruited in New Caledonia with higher density genotyping
|
HumanOmniExpressExome-8 BeadChip | 34 |
EGAD00010000957 |
Rheumatic heart disease cases recruited in New Caledonia
|
HumanCore-24 BeadChip | 465 |
EGAD00010000958 |
Healthy volunteers recruited in Fiji with higher density genotyping
|
HumanOmniExpressExome-8 BeadChip | 32 |
EGAD00010000959 |
Healthy volunteers recruited in Fiji
|
HumanCore-24 BeadChip | 854 |
EGAD00010000960 |
Definite and borderline rheumatic heart disease cases and patients with mild non-diagnostic valvulopathy recruited in Samoa
|
HumanCore-24 BeadChip | 126 |
EGAD00010000961 |
Rheumatic heart disease cases recruited in Fiji
|
HumanCore-24 BeadChip | 535 |
EGAD00010000962 |
Healthy volunteers and missing phenotype individuals recruited in New Caledonia with higher density genotyping
|
HumanOmniExpressExome-8 BeadChip | 30 |
EGAD00010000963 |
Healthy volunteers recruited in Samoa
|
HumanCore-24 BeadChip | 24 |
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