Whole genome bisulfite sequencing of hepatitis B virus-associated hepatocellular carcinoma tumor and non-cancerous samples

To understand comprehensive epigenetic alterations in hepatitis B virus-associated HCC, we have conducted a whole genome bisulfite sequencing of 5 tumor samples and 3 non-cancerous samples (3 pairs and 2 tumors).

Type: Other
Archiver: EGA European Genome-Phenome Archive

2 Datasets 1 Publication

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001004032	Fastq files of whole-genome bisulfite sequence of non-cancerous tissue of HBV-associated hepatocellular carcinoma	Illumina Genome Analyzer IIx Illumina HiSeq 2000	3
EGAD00001004033	Fastq files of whole-genome bisulfite sequence of tumor tissue of HBV-associated hepatocellular carcinoma	Illumina Genome Analyzer IIx Illumina HiSeq 2000	5

Publications	Citations
Epigenetic landscape influences the liver cancer genome architecture. Hama N, Totoki Y, Miura F, Tatsuno K, Saito-Adachi M, Nakamura H, Arai Y, Hosoda F, Urushidate T, Ohashi S, Mukai W, Hiraoka N, Aburatani H, Ito T, Shibata T. Nat Commun 9: 2018 1643	24