Study
Comprehensive genomic profiling of matched glioblastoma tumours, cell-lines, and xenografts reveals genomic stability and adaptation to disparate growth environments
| Study ID | Alternative Stable ID | Type |
|---|---|---|
| EGAS00001002709 | Other |
Study Description
The mandate of this project was to use drug screening to deliver new drugs for glioblastoma (GBM) to clinical trials, and perform genomic assessment of GBM to discover new therapeutic targets and predictors of response. The sequencing data in this set was derived from GBM patient tumor samples, matched brain tumor initiating cells lines (BTICs), and tumor tissue derived from orthotopic implants.
Study Datasets 61 datasets.
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
| Dataset ID | Description | Technology | Samples |
|---|---|---|---|
| EGAD00001004221 |
WGS and RNA-Seq data from a GBM patient PT-AB0029
|
Illumina HiSeq 2000 | N/A |
| EGAD00001004222 |
WGS and RNA-Seq data from a GBM patient PT-AB6372
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 2 |
| EGAD00001004223 |
WGS and RNA-Seq data from a GBM patient PT-AH1410
|
Illumina HiSeq 2000 | N/A |
| EGAD00001004224 |
WGS and RNA-Seq data from a GBM patient PT-AK7565
|
Illumina HiSeq 2500 | N/A |
| EGAD00001004225 |
WGS and RNA-Seq data from a GBM patient PT-AL4257
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 2 |
| EGAD00001004226 |
Genome sequence data from a GBM patient PT-AR3050
|
Illumina HiSeq 2500 | N/A |
| EGAD00001004227 |
WGS and RNA-Seq data from a GBM patient PT-AR5365
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 1 |
| EGAD00001004228 |
WGS and RNA-Seq data from a GBM patient PT-BK0248
|
Illumina HiSeq 2500 | N/A |
| EGAD00001004229 |
WGS and RNA-Seq data from a GBM patient PT-BM772
|
Illumina HiSeq 2000 | 1 |
| EGAD00001004230 |
WGS and RNA-Seq data from a GBM patient PT-CA2271
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | N/A |
| EGAD00001004231 |
WGS and RNA-Seq data from a GBM patient PT-CM1209
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 2 |
| EGAD00001004232 |
WGS and RNA-Seq data from a GBM patient PT-DF5919
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 2 |
| EGAD00001004233 |
WGS and RNA-Seq data from a GBM patient PT-DS9789
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 1 |
| EGAD00001004234 |
WGS and RNA-Seq data from a GBM patient PT-EV3071
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | N/A |
| EGAD00001004235 |
WGS and RNA-Seq data from a GBM patient PT-FB6711
|
Illumina HiSeq 2000 | 1 |
| EGAD00001004236 |
Genome sequence data from a GBM patient PT-FR7453
|
N/A | |
| EGAD00001004237 |
WGS and RNA-Seq data from a GBM patient PT-GB9186
|
Illumina HiSeq 2000 | N/A |
| EGAD00001004238 |
WGS and RNA-Seq data from a GBM patient PT-GB9483
|
Illumina HiSeq 2500 | N/A |
| EGAD00001004239 |
WGS and RNA-Seq data from a GBM patient PT-GC1519
|
Illumina HiSeq 2500 | 1 |
| EGAD00001004240 |
WGS and RNA-Seq data from a GBM patient PT-GJ3716
|
Illumina HiSeq 2500 | 2 |
| EGAD00001004241 |
WGS and RNA-Seq data from a GBM patient PT-GR2309
|
Illumina HiSeq 2500 | N/A |
| EGAD00001004242 |
WGS and RNA-Seq data from a GBM patient PT-HN6692
|
Illumina HiSeq 2500 | N/A |
| EGAD00001004243 |
WGS and RNA-Seq data from a GBM patient PT-HO0394
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | N/A |
| EGAD00001004244 |
WGS data from a GBM patient PT-HS9105
|
N/A | |
| EGAD00001004245 |
WGS and RNA-Seq data from a GBM patient PT-JB1730
|
Illumina HiSeq 2000 | N/A |
| EGAD00001004246 |
WGS and RNA-Seq data from a GBM patient PT-JE6375
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | N/A |
| EGAD00001004247 |
WGS and RNA-Seq data from a GBM patient PT-JP2405
|
Illumina HiSeq 2500 | N/A |
| EGAD00001004248 |
WGS and RNA-Seq data from a GBM patient PT-JW6420
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 1 |
| EGAD00001004249 |
WGS and RNA-Seq data from a GBM patient PT-KM5291
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 1 |
| EGAD00001004250 |
WGS and RNA-Seq data from a GBM patient PT-LC3356
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 1 |
| EGAD00001004251 |
WGS and RNA-Seq data from a GBM patient PT-LR9369
|
Illumina HiSeq 2000 | N/A |
| EGAD00001004252 |
WGS and RNA-Seq data from a GBM patient PT-LS4891
|
Illumina HiSeq 2000 | N/A |
| EGAD00001004253 |
WGS and RNA-Seq data from a GBM patient PT-MB9777
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 3 |
| EGAD00001004254 |
WGS and RNA-Seq data from a GBM patient PT-MD9088
|
Illumina HiSeq 2500 | 1 |
| EGAD00001004255 |
WGS and RNA-Seq data from a GBM patient PT-PD6881
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 1 |
| EGAD00001004256 |
WGS and RNA-Seq data from a GBM patient PT-RD1291
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | N/A |
| EGAD00001004257 |
WGS and RNA-Seq data from a GBM patient PT-RL5404
|
Illumina HiSeq 2000 | 1 |
| EGAD00001004258 |
WGS and RNA-Seq data from a GBM patient PT-RL7940
|
Illumina HiSeq 2000 | N/A |
| EGAD00001004259 |
WGS and RNA-Seq data from a GBM patient PT-RW9277
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 1 |
| EGAD00001004260 |
WGS and RNA-Seq data from a GBM patient PT-SK0976
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 1 |
| EGAD00001004261 |
WGS and RNA-Seq data from a GBM patient PT-SO0258
|
Illumina HiSeq 2000 | 1 |
| EGAD00001004262 |
WGS and RNA-Seq data from a GBM patient PT-TM5196
|
Illumina HiSeq 2500 | 1 |
| EGAD00001004263 |
WGS and RNA-Seq data from a GBM patient PT-VO7089
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | N/A |
| EGAD00001004264 |
WGS data from a GBM patient PT-WP9124
|
Illumina HiSeq 2500 | 1 |
| EGAD00001008516 |
WGS and RNA-Seq data from a GBM patient PT-BM8772
|
Illumina HiSeq 2500 | 1 |
| EGAD00001008517 |
WGS and RNA-Seq data from a GBM patient PT-CM3220
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 2 |
| EGAD00001008518 |
WGS and RNA-Seq data from a GBM patient PT-DM9089
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 2 |
| EGAD00001008519 |
WGS and RNA-Seq data from a GBM patient PT-GE7528
|
Illumina HiSeq 2000 | 1 |
| EGAD00001008520 |
WGS and RNA-Seq data from a GBM patient PT-GI2070
|
Illumina HiSeq 2000 | 1 |
| EGAD00001008521 |
WGS and RNA-Seq data from a GBM patient PT-JR9883
|
Illumina HiSeq 2000 | 1 |
| EGAD00001008522 |
WGS and RNA-Seq data from a GBM patient PT-LC6372
|
Illumina HiSeq 2500 | 1 |
| EGAD00001008523 |
WGS and RNA-Seq data from a GBM patient PT-ML9537
|
Illumina HiSeq 2500 | 1 |
| EGAD00001008524 |
WGS data from a GBM patient PT-MS8478
|
N/A | |
| EGAD00001008525 |
WGS and RNA-Seq data from a GBM patient PT-PR5617
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 2 |
| EGAD00001008526 |
WGS and RNA-Seq data from a GBM patient PT-PV2594
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 5 |
| EGAD00001008527 |
WGS and RNA-Seq data from a GBM patient PT-RV2286
|
Illumina HiSeq 2500 | 1 |
| EGAD00001008528 |
WGS data from a GBM patient PT-SB3465
|
N/A | |
| EGAD00001008529 |
WGS and RNA-Seq data from a GBM patient PT-SJ5453
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 3 |
| EGAD00001008530 |
WGS and RNA-Seq data from a GBM patient PT-SS3647
|
Illumina HiSeq 2000,Illumina HiSeq 2500 | 3 |
| EGAD00001008531 |
WGS and RNA-Seq data from a GBM patient PT-WR7927
|
Illumina HiSeq 2500 | 1 |
| EGAD00001008532 |
WGS and RNA-Seq data from a GBM patient PT-WT4796
|
Illumina HiSeq 2000 | 1 |
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