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Capture Hi-C on Hodgkin lymphoma cell line L-428

In situ promoter capture Hi-C on Hodgkin lymphoma cell line L-428 in experimental triplicates. Hi-C libraries were prepared as previously described (Orlando et al., 2018, Promoter capture was based on 32,313 biotinylated 120-mer RNA baits (Agilent). Hi-C libraries were sequenced using Illumina HiSeq 2000 technology. The files are in FASTQ format.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001004321 Illumina HiSeq 2000 1
Publications Citations
Genome-wide association study implicates immune dysfunction in the development of Hodgkin lymphoma.
Blood 132: 2018 2040-2052
Algorithmic considerations when analysing capture Hi-C data.
Wellcome Open Res 5: 2020 289