Organoid Models of Human Liver Cancers Derived from Tumor Needle Biopsies

Study ID Alternative Stable ID Type
EGAS00001003115 Cancer Genomics

Study Description

Study Datasets 2 datasets.

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Dataset ID Description Technology Samples
Whole-exome sequencing was performed from organoids derived from 10 liver cancer biopsies (7 hepatocellular carcinoma and 3 cholangiocarcinoma), corresponding liver and non-tumoral biopsies. For 3 of the organoids, both early and late passage organoids were sequenced. Whole-exome sequencing was performed using the Agilent Clinical Research Exome capture kit followed by Illumina sequencing. BAM files are provided in this dataset.
Illumina HiSeq 2500 31
RNA-seq of Bone Metastasis from breast and prostate cancer (4 breast and 5 prostate samples). Dataset contains BAM files from RNA-seq performed using Illumina HiSeq 2500.
Illumina HiSeq 2500,Illumina NovaSeq 6000,Ion Torrent S5 XL 288

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