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Alternative splicing in Shh-MB

We analyzed alternative splicing with Shh medulloblastoma. This dataset contains bam files of whole genome sequencing from 4 cases. Genomic DNA was isolated from both tumor and matched control specimens. We performed whole genome sequence on Illumina Hiseq.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001004347 Illumina HiSeq 2000 8
Publications Citations
Recurrent noncoding U1 snRNA mutations drive cryptic splicing in SHH medulloblastoma.
Nature 574: 2019 707-711
The transcriptional landscape of Shh medulloblastoma.
Nat Commun 12: 2021 1749
Failure of human rhombic lip differentiation underlies medulloblastoma formation.
Nature 609: 2022 1021-1028