Familial Myeloid Leukemia - EGA European Genome-Phenome Archive

Study

Familial Myeloid Leukemia

Study ID	Alternative Stable ID	Type
EGAS00001003399		Other

Exomes from 48 individuals affected by some form of familial myeloid leukemia (MDS, AML, BMF TCP) with variants in 60 candidate genes

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Dataset ID	Description	Technology	Samples
EGAD00001004539	Whole exome sequencing (WES) libraries were prepared from 200ng of genomic DNA using the Agilent SureSelect XT Target Enrichment System for Illumina Paired-End Multiplexed Sequencing Library coupled with the Agilent SureSelect XT Human all exon v6 capture reagent. Libraries were sequenced on a NextSeq 550 sequencer using the High output 300 cycles kit generating 150bp paired end single-indexed reads. Alignment against b37 using Novoalign (version 3.02.08). Whole exome sequencing (WES) libraries were prepared from 200ng of genomic DNA using the Agilent SureSelect XT Target Enrichment System for Illumina Paired-End Multiplexed Sequencing Library coupled with the Agilent SureSelect XT Human all exon v6 capture reagent. Libraries were sequenced on a NextSeq 550 sequencer using the High output 300 cycles kit generating 150bp paired end single-indexed reads. Alignment against b37 using Novoalign (version 3.02.08).	Illumina HiSeq 2000	48

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