Study

Chromatin accessability in cytokine induced immune cell states

Study ID Alternative Stable ID Type
EGAS00001003501 Epigenetics

Study Description

We isolated T cells and monocotyes from healthy platelet donors and cultured them in resting and stimulated conditions with addition of a range of cytokines. We performed ATAC sequencing to assess the chromatin accessability in different cytokines treated cells. These cellular profiles were used to map risk variants to the cytokine-induced cell states relevant for autoimmune diseases.

Study Datasets 1 dataset.

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Dataset ID Description Technology Samples
EGAD00001004831
We isolated T cells and monocotyes from healthy platelet donors and cultured them in resting and stimulated conditions with addition of a range of cytokines. We performed ATAC sequencing to assess the chromatin accessability in different cytokines treated cells. These cellular profiles were used to map risk variants to the cytokine-induced cell states relevant for autoimmune diseases. . This dataset contains all the data available for this study on 2019-03-11.
Illumina HiSeq 2500,Illumina MiSeq 183

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