Indonesian Genome Diversity Project 2

High-coverage whole genome sequences were collected to study patterns of genomic variation across the broad geography of Indonesia and New Guinea. This region has experienced an extremely complex demographic history, including repeated bouts of admixture with archaic and modern human groups. This dataset reports whole genome sequences for 82 individuals from different populations from Mentawai, New Guinea, Sumatra and Sumba islands. Particular attention has been paid in the original study to genomic signals that are informative for population history, including admixture with archaic hominins and the role of modern human admixture during the late Pleistocene and Holocene.

Type: Other
Archiver: European Genome-Phenome Archive (EGA)

1 Dataset 1 Publication

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001005059	This dataset reports whole genome sequences for 82 individuals from different populations from Mentawai, New Guinea, Sumatra and Sumba islands.	HiSeq X Ten	82

Publications	Citations
Genetic architecture of gene regulation in Indonesian populations identifies QTLs associated with global and local ancestries. Natri HM, Hudjashov G, Jacobs G, Kusuma P, Saag L, Darusallam CC, Metspalu M, Sudoyo H, Cox MP, Gallego Romero I, Banovich NE. Am J Hum Genet 109: 2022 50-65	5