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GBM cancer stem cell lines -RNA-seq and WGS data

Glioblastoma stem cell lines have been profiled for RNA-seq and WGS

Type: Other
Archiver: European Genome-Phenome Archive (EGA)

1 Dataset 1 Publication

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001005077	This dataset contains 3 GBM stem cell samples profiled by RNA-seq. Two of those samples have been profiled with WGS as well (with matched blood WGS data available)	HiSeq X Five Illumina HiSeq 2500 NextSeq 500	7

Publications	Citations
High-resolution structural genomics reveals new therapeutic vulnerabilities in glioblastoma. Johnston MJ, Nikolic A, Ninkovic N, Guilhamon P, Cavalli FMG, Seaman S, Zemp FJ, Lee J, Abdelkareem A, Ellestad K, Murison A, Kushida MM, Coutinho FJ, Ma Y, Mungall AJ, Moore R, Marra MA, Taylor MD, Dirks PB, Pugh TJ, Morrissy S, St Croix B, Mahoney DJ, Lupien M, Gallo M. Genome Res 29: 2019 1211-1222	38