Whole-genome bisulfite sequencing analysis of low-grade astrocytomas in the ICGC PedBrain Tumor Project

Study ID Alternative Stable ID Type
EGAS00001004019 Other

Study Description

Pilocytic Astrocytoma (PA) is the most common pediatric brain tumor. While genome and transcriptome landscapes are well-studied, data of the complete methylome, tumor cell composition and immune infiltration are scarce. We generated whole genome bisulfite sequence data (WGBS) of nine PAs to find evidence for a link of focal methylation differences and differential gene expression to immune infiltration.

Study Datasets 1 dataset.

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Dataset ID Description Technology Samples
18 WGBS lanes for 9 samples of pilocytic astrocytoma.
Illumina HiSeq 2000 9

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