Deep sequencing of the gut microbiome from 946 healthy donors of the Milieu Intérieur cohort

In this study, we aim to determine, in a thousand healthy donors, how the profile and dynamics of the gut microbiome are affected by host factors such as sex, age and lifestyle parameters.

Type: Other
Archiver: European Genome-Phenome Archive (EGA)

1 Dataset 3 Publications

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001006554	This dataset includes 1,359 paired-end shotgun metagenomics samples from 946 healthy donors of the Milieu Intérieur cohort. 413 of the donors provided two samples (V1 and V2).		1359

Publications	Citations
Gut microbiome stability and dynamics in healthy donors and patients with non-gastrointestinal cancers. Byrd AL, Liu M, Fujimura KE, Lyalina S, Nagarkar DR, Charbit B, Bergstedt J, Patin E, Harrison OJ, Quintana-Murci L, Mellman I, Duffy D, Albert ML, Milieu Intérieur Consortium. J Exp Med 218: 2021 e20200606	32
Unveiling <i>Candida albicans</i> intestinal carriage in healthy volunteers: the role of micro- and mycobiota, diet, host genetics and immune response. Delavy M, Sertour N, Patin E, Le Chatelier E, Cole N, Dubois F, Xie Z, Saint-André V, Manichanh C, Walker AW, Quintana-Murci L, Duffy D, d'Enfert C, Bougnoux ME, Consortium MI. Gut Microbes 15: 2023 2287618	5
Toxigenic Clostridium perfringens Isolated from At-Risk Paediatric Inflammatory Bowel Disease Patients. Kuo J, Uzunovic J, Jacobson A, Dourado M, Gierke S, Rajendram M, Keilberg D, Mar J, Stekol E, Curry J, Verstraete S, Lund J, Liang Y, Tamburini FB, Omattage NS, Masureel M, Rutherford ST, Hackos DH, Tan MW, Byrd AL, Keir ME, Skippington E, Storek KM. J Crohns Colitis 18: 2024 985-1001	1